The agent-smoke function resolution check flags underscore-containing
identifiers as potential undefined bash functions. Rename in_code to
incode to match the convention used by the existing capture variable.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Add missing `set -euo pipefail` to three scripts per AGENTS.md conventions:
- lib/ci-helpers.sh
- lib/parse-deps.sh
- supervisor/supervisor-poll.sh
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Replace lib/parse-deps.py with lib/parse-deps.sh to keep the toolchain
all-bash. Rewrite supervisor P3b cycle detection and P3c stale dep check
as pure bash using associative arrays and DFS.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>